BAMBOO - 2013 - Annual activity report

BAMBOO

BAMBOO - 2013

Project-Team Bamboo

Members

Overall Objectives

Highlights of the Year

Research Program

Formal methods
Symbiosis
Intracellular interactions

Application Domains

Domain

Software and Platforms

AcypiCyc
AlViE
Cassis
Coala
C3Part & Isofun
CycADS
Eucalypt
Gobbolino & Touché
KisSNP
kisSplice & KisSplice2igv
LASAGNE
MetExplore
Migal
Mirinho
MotusWEB
Motus
PhEVER
PepLine
Pitufo and family
Repseek
Smile
Tuiuiu
UniPathway

New Results

Symbiont genome evolution and dynamics
Host-symbiont metabolic dialog
Host-symbiont genetic dialog
Symbiont-host co-cladogenesis and co-evolution at the sequence and network levels
NGS for biodiversity
NGS for genotypic variation detection

Partnerships and Cooperations

Regional Initiatives
National Initiatives
European Initiatives
International Initiatives
International Research Visitors

Dissemination

Scientific Animation
Teaching - Supervision - Juries

Bibliography

Publications of the year

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2013 Project-Team Activity Report

BAMBOO

An algorithmic view on genomes, cells, and environments

Research centre: Grenoble - Rhône-Alpes

In partnership with: CNRS, Institut national des sciences appliquées de Lyon, Université Claude Bernard (Lyon 1)

In collaboration with: Laboratoire de Biométrie et Biologie Evolutive (LBBE)

Field: Digital Health, Biology and Earth

Theme: Computational Biology

Keywords: Computational Biology, Systems Biology, Analysis Of Algorithms, Genomics, Network Modeling