BEAGLE - 2014 - Annual activity report

BEAGLE

BEAGLE - 2014

Project-Team Beagle

Members

Overall Objectives

Research Program

Introduction
Computational Cell Biology
Models of genome evolution

New Software and Platforms

Aevol (artificial evolution)
EvoEvo modelization tool
FluoBacTracker
Ancestral Genome Reconstructions
DMT4SP mining tool

New Results

Highlights of the Year
Sparse short-distance connections enhance calcium wave propagation in a 3D model of astrocyte networks
Glutamate Mediated Astrocytic Filtering of Neuronal Activity
Space-induced bifurcation in repression-based transcriptional circuits
Modeling interaction of transcription processes in neighbour genes
A model of genome size evolution
A novel view on reductive evolution
Genome evolution aware gene trees
Variable food availability increases weight: a mathematical prediction
Insights on gene family dynamics from digital genetics experiments

Partnerships and Cooperations

Regional Initiatives
National Initiatives
European Initiatives
International Initiatives
International Research Visitors

Dissemination

Promoting Scientific Activities
Teaching - Supervision - Juries
Popularization

Bibliography

Major publications
Publications of the year
References in notes

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2014 Project-Team Activity Report

BEAGLE

Artificial Evolution and Computational Biology

Research centre: Grenoble - Rhône-Alpes

In partnership with: Institut national des sciences appliquées de Lyon, Université Claude Bernard (Lyon 1)

In collaboration with: Laboratoire de Biométrie et Biologie Evolutive (LBBE), Laboratoire d'InfoRmatique en Image et Systèmes d'information, Laboratoire de Recherche en Cardiovasculaire, Métabolisme, Diabétologie et Nutrition

Field: Digital Health, Biology and Earth

Theme: Computational Biology

Keywords: Computational Biology, Modeling, Cell Biology, Evolution, Systems Biology