Team
Bamboo
Overall Objectives
Scientific Foundations
Application Domains
Software
New Results
- Sex-specific impact of meiotic recombination on nucleotide composition
- Modelling the influence of karyotype on the distribution of meiotic recombination
- Finding long and multiple repeats with edit distance
- Genomics of symbiosis
- Bacterial syntenies
- Spatial synteny in Eukaryotes
- Chimeric transcripts in Eukaryotes
- KisSplice: de-novo calling alternative splicing events from RNA-seq data
- Transcriptomics of symbiosis in the Asobara tabida-Wolbachia association
- Navigating through unexplored pre-miRNA candidates
- Exploration of the genetic network of Buchnera aphidicola
- Annotation database system to ease the development and update of BioCyc databases
- Representation and curation of metabolic pathways: UniPathway
- Representation and curation of biochemical reactions: Rhea
- Metabolic reconstruction of Klebsiella pneumoniae str. Kp13
- Clustering of elementary modes and metabolic modules identification
- Enumeration of metabolic stories
- Identification of all the minimal precursor sets for a given set of targets
- Metabolic network comparison
- Wolbachia detection
- Genetic architecture of parasite infection
- Population structure and dynamics
Partnerships and Cooperations
Dissemination
Bibliography
Team
Bamboo
Overall Objectives
Scientific Foundations
Application Domains
Software
New Results
- Sex-specific impact of meiotic recombination on nucleotide composition
- Modelling the influence of karyotype on the distribution of meiotic recombination
- Finding long and multiple repeats with edit distance
- Genomics of symbiosis
- Bacterial syntenies
- Spatial synteny in Eukaryotes
- Chimeric transcripts in Eukaryotes
- KisSplice: de-novo calling alternative splicing events from RNA-seq data
- Transcriptomics of symbiosis in the Asobara tabida-Wolbachia association
- Navigating through unexplored pre-miRNA candidates
- Exploration of the genetic network of Buchnera aphidicola
- Annotation database system to ease the development and update of BioCyc databases
- Representation and curation of metabolic pathways: UniPathway
- Representation and curation of biochemical reactions: Rhea
- Metabolic reconstruction of Klebsiella pneumoniae str. Kp13
- Clustering of elementary modes and metabolic modules identification
- Enumeration of metabolic stories
- Identification of all the minimal precursor sets for a given set of targets
- Metabolic network comparison
- Wolbachia detection
- Genetic architecture of parasite infection
- Population structure and dynamics
Partnerships and Cooperations
Dissemination
Bibliography
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