Bibliography

Major publications by the team in recent years

1J. Allard, H. Courtecuisse, F. Faure.

Implicit FEM Solver on GPU for Interactive Deformation Simulation, in: GPU Computing Gems Jade Edition, NVIDIA/Elsevier, October 2011, chap. 21.
2J. Allard, F. Faure, H. Courtecuisse, F. Falipou, C. Duriez, P. G. Kry.

Volume Contact Constraints at Arbitrary Resolution, in: ACM Transactions on Graphics (Proceedings of SIGGRAPH 2010), August 2010, vol. 29(3).

http://www.sofa-framework.org/projects/ldi
3S. Cotin, H. Delingette, N. Ayache.

Real-Time Elastic Deformations of Soft Tissues for Surgery Simulation, in: IEEE Transactions on Visualization and Computer Graphics, 1999, vol. 5, n^o 1, p. 62–73.
4J. Dequidt, J. Lenoir, S. Cotin.

: Interactive Contacts Resolution Using Smooth Surface Representation, in: Proc. Medical Image Computing and Computer-Assisted Interventions (MICCAI), 2007, p. 850-857.
5J. Dequidt, M. Marchal, C. Duriez, S. Cotin.

Interactive Simulation of Embolization Coils: Modeling and Experimental Validation., in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2008, p. 695-702.
6C. Duriez, S. Cotin, J. Lenoir, P. F. Neumann.

New Approaches to Catheter Navigation for Interventional Radiology Simulation, in: Computer Aided Surgery, 2006, vol. 11, p. 300-308.
7C. Duriez, F. Dubois, A. Kheddar, C. Andriot.

Realistic Haptic Rendering of Interacting Deformable Objects in Virtual Environments, in: IEEE Transactions on Visualization and Computer Graphics, 2006, vol. 12, n^o 1, p. 36–47.

http://dx.doi.org/10.1109/TVCG.2006.13
8A. Kerdok, S. Cotin, M. Ottensmeyer, A. Galea, R. Howe, S. Dawson.

Truth Cube: Establishing Physical Standards for Real-Time Soft Tissue Simulation, in: Medical Image Analysis, September 2003, vol. 7, n^o 3.
9V. Luboz, X. Wu, K. Krissian, C. Westin, R. Kikinis, S. Cotin, S. Dawson.

A segmentation and reconstruction technique for 3D vascular structures, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2005, p. 43-50.
10Y. Wei, S. Cotin, F. Le, J. Allard, P. Chunhuong.

Toward Real-time Simulation of Blood-Coil Interaction during Aneurysm Embolization, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2009.

Publications of the year

International Conferences with Proceedings

11A. Bilger, C. Essert, C. Duriez, S. Cotin.

Brain-shift aware risk map for Deep Brain Stimulation Planning, in: DBSMC - MICCAI 2012 Workshop on Deep Brain Stimulation Methodological Challenges, Nice, France, October 2012.

http://hal.inria.fr/hal-00736773
12N. Haouchine, J. Dequidt, M.-O. Berger, S. Cotin.

Deformation-based Augmented Reality for Hepatic Surgery, in: Medicine Meets Virtual Reality, MMVR 20, San Diego, États-Unis, February 2013.

http://hal.inria.fr/hal-00768372
13N. Haouchine, J. Dequidt, E. Kerrien, M.-O. Berger, S. Cotin.

Physics-based Augmented Reality for 3D Deformable Object, in: VRIPHYS - Virtual Reality Interaction and Physical Simulation, Darmstadt, Allemagne, December 2012.

http://hal.inria.fr/hal-00768362
14D. Selosse, J. Dequidt, L. Grisoni.

A Sketch-Based Interface for Annotation of 3D Brain Vascular Reconstructions, in: Computer Graphics International 2012, Bournemouth, Royaume-Uni, none, 2012.

http://hal.inria.fr/hal-00758420
15A. Yureidini, E. Kerrien, S. Cotin.

Robust RANSAC-based blood vessel segmentation, in: SPIE Medical Imaging, San Diego, CA, United States, D. R. Haynor, S. Ourselin (editors), SPIE Press, February 2012, vol. 8314, 8314M p, Copyright 2012 Society of Photo-Optical Instrumentation Engineers. One print or electronic copy may be made for personal use only. Systematic electronic or print reproduction and distribution, duplication of any material in this paper for a fee or for commercial purposes, or modification of the content of the paper are prohibited.. [ DOI : 10.1117/12.911670 ]

http://hal.inria.fr/hal-00642003
16A. Yureidini, E. Kerrien, J. Dequidt, C. Duriez, S. Cotin.

Local implicit modeling of blood vessels for interactive simulation, in: MICCAI - 15th International Conference on Medical Image Computing and Computer-Assisted Intervention, Nice, France, N. Ayache, H. Delingette, P. Golland, K. Moria (editors), Lecture Notes in Computer Science, Springer, October 2012, vol. 7510, p. 553-560. [ DOI : 10.1007/978-3-642-33415-3_68 ]

http://hal.inria.fr/hal-00741307

Conferences without Proceedings

17H. Talbot, S. Marchesseau, C. Duriez, H. Courtecuisse, J. Relan, M. Sermesant, S. Cotin, H. Delingette.

Interactive Electromechanical Model of the Heart for Patient-Specific Therapy Planning and Training using SOFA, in: VPH 2012, Londres, Royaume-Uni, September 2012.

http://hal.inria.fr/hal-00751537

Scientific Books (or Scientific Book chapters)

18F. Faure, C. Duriez, H. Delingette, J. Allard, B. Gilles, S. Marchesseau, H. Talbot, H. Courtecuisse, G. Bousquet, I. Peterlik, S. Cotin.

SOFA: A Multi-Model Framework for Interactive Physical Simulation, in: Soft Tissue Biomechanical Modeling for Computer Assisted Surgery, Y. Payan (editor), Springer, June 2012. [ DOI : 10.1007/8415_2012_125 ]

http://hal.inria.fr/hal-00681539
19Y. Wei, S. Cotin, J. Dequidt, C. Duriez, J. Allard, E. Kerrien.

A (Near) Real-Time Simulation Method of Aneurysm Coil Embolization, in: Aneurysm, Y. Murai (editor), InTech, August 2012, p. 223-248. [ DOI : 10.5772/48635 ]

http://hal.inria.fr/hal-00736865

References in notes

20J. Allard, M. Marchal, S. Cotin.

Fiber-Based Fracture Model for Simulating Soft Tissue Tearing, in: Medicine Meets Virtual Reality (MMVR), 2009, p. 13-18.
21R. Anxionnat, J. Dequidt, E. Kerrien, C. Duriez, M.-O. Berger, S. Cotin.

Evaluation of a High-Fidelity Simulation for the Endovascular Treatment of Intracranial Aneurysms, in: Congress of the World Federation of Interventional Neuroradiology (WFITN), 2009.
22J. Bacon, N. Tardella, J. Pratt, J. Hu, J. English.

The Surgical Simulation and Training Markup Language (SSTML): An XML-Based Language for Medical Simulation, in: Medicine Meets Virtual Reality (MMVR), 2005, p. 37-42.
23S. Balocco, S. Camara, A. Frangi.

Towards Regional Elastogrpahy of Intracranial Aneurysms, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2008.
24M. Bro-Nielsen, S. Cotin.

Real-time deformable models for surgery simulation using finite elements and condensation, in: Computer Graphics Forum, 1996, vol. 3(15), p. 57-66.
25M. Cavusoglu, T. Goktekin, F. Tendick, S. Sastry.

GiPSi: An Open Source/Open Architecture Software Development Framework for Surgical Simulation, in: Medicine Meets Virtual Reality (MMVR), 2004, p. 46-48.
26O. Comas, C. Duriez, S. Cotin.

Shell Model for Reconstruction and Real-Time Simulation of Thin Anatomical Structures, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), Lecture Notes in Computer Science, 2010, vol. 6362, p. 371-379.
27S. Cotin, H. Delingette, N. Ayache.

Real-time elastic deformations of soft tissues for surgery simulation, Inria, 1998.
28J. Dequidt, C. Duriez, S. Cotin, E. Kerrien.

Towards Interactive Planning of Coil Embolization in Brain Aneurysms, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2009.
29C. Duriez, C. Guebert, M. Marchal, S. Cotin, L. Grisoni.

Interactive Simulation of Flexible Needle Insertions Based on Constraint Models, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2009, p. 291-299.
30M. Ferrant, S. Warfield, A. Nabavi, F. Jolesz, R. Kikinis.

Registration of 3D Intraoperative MR Images of the Brain Using a Finite Element Biomechanical Mode, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2000.
31C. Groden, J. Laudan, S. Gatchell, H. Zeumer.

Three-Dimensional Pulsatile Flow Simulation Before and After Endovascular Coil Embolization of a Terminal Cerebral Aneurysm, in: Journal of Cerebral Blood Flow and Metabolism, 2001, vol. 21, p. 1464-1471.
32C. Guebert, C. Duriez, L. Grisoni.

Unified Processing of Constraints for Interactive Simulation, in: Workshop on Virtual Reality Interaction and Physical Simulation (VRIPHYS), 2008.
33N. Kakalis, A. Mitsos, J. Byrne, Y. Ventikos.

The haemodynamics of endovascular aneurysm treatment: a computational modelling approach for estimating the influence of multiple coil deployment, in: IEEE Transactions on Medical Imaging, 2008, vol. 27(6), p. 814-824.
34E. Kerrien, J. Dequidt, M.-O. Berger.

Refining the 3D surface of blood vessels from a reduced set of 2D DSA images, in: Workshop on Augmented environments for Medical Imaging and Computer-aided Surgery, 2008, p. 61-69.
35P. Meseure, J. Davanne, J. Lenoir, L. France, F. Triquet, C. Chaillou.

A Physically-Based Virtual Environment dedicated to Surgical Simulation, in: Surgery Simulation and Soft Tissue Modeling, 2003, p. 1002-1010.
36K. Montgomery, C. Bruyns, J. Brown, G. Thonier, A. Tellier, J. Latombe.

Spring: A General Framework for Collaborative, Real-Time Surgical Simulation, in: Medicine Meets Virtual Reality (MMVR), 2002.
37A. Wittek, R. Kikinis, S. Warfield, K. Miller.

Brain Shift Computation Using a Fully Nonlinear Biomechanical Model, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2005, p. 583-590.
38X. Wu, J. Allard, S. Cotin.

Real-time Modeling of Vascular Flow for Angiography Simulation, in: Medical Image Computing and Computer Assisted Intervention (MICCAI), 2007, p. 850-857.

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