Section: Dissemination

Promoting Scientific Activities

Scientific events organisation

General chair, scientific chair

• Workshop on Computational Optimization, Lodz, Poland [A. Mucherino]

Scientific events selection

Member of the conference program committees

• BIBM 2015: IEEE International Conference on Bioinformatics and Biomedicine [D. Lavenier]

• HPiC 2015: EEE International Conference on High Performance Computing [D. Lavenier]

• PBC 2015: Workshop on Parallel Computational Biology [D. Lavenier]

• RECOMB-SEQ 2015: RECOMB Satellite Workshop on Massively Parallel Sequencing [D. Lavenier]

• WABI 2015: Workshop on Algorithms for Bioinformatics [D. Lavenier]

• BIOKDD 2015: Biological Knowledge Discovery and Data Mining [D. Lavenier]

Reviewer

• WABI 2015 [C. Lemaitre]

Journal

Member of the editorial boards

• Discrete Applied Mathematics [A. Mucherino]

Reviewer - Reviewing activities

• Advances in Bioinformatics [D. Lavenier]

• Algorithms for Molecular Biology [D. Lavenier]

• Bioinformatics [C. Lemaitre, D. Lavenier]

• BMC Bioinformatics [D. Lavenier]

• BMC Genomics [D. Lavenier]

• Briefing in Bioinformatics [D. Lavenier]

• Computers and Electronics in Agriculture [A. Mucherino]

• IEEE Transactions on Reconfigurable Technology and Systems [D. Lavenier]

• Journal of Biomedical and Health Informatics [D. Lavenier]

• Plos One [D. Lavenier]

• Journal of Computational and Applied Mathematics [A. Mucherino]

• International Transactions in Operational Research [A. Mucherino]

• Nature Scientific Reports [F. Legeai]

• Nucleic Acids Research [D. Lavenier]

Invited talks

• P. Peterlongo, Reference-free NGS data analysis, Litis, Rouen, March 2015.

• A. Mucherino, Distance Geometry and Discretization Orders, University of Aveiro, Portugal, May 2015.

• P. Peterlongo, Mapping reads on de Bruijn graphs, Bordeaux, Labri team, May 2015.

• A. Mucherino, The several applications of the Distance Geometry, University of Florianopolis, Brazil, June 2015.

• C. Lemaitre, Reference-free detection of genomic variants: from SNPs to inversions, "ABS4NGS", Institut Curie, Paris, France, June 2015.

• P. Peterlongo, de Bruijn Graph usage and limitations, Workshop on the future of algorithmic computational biology, Bertinoro, Italy, June 2015.

• D. Lavenier, Genomic Data Processing, "Journée Thématique GDR SoC-SiP", France, Nov. 2015.

• P. Peterlongo, Prédiction de variants sans (ou avec) génome de référence, MIA team, Toulouse, Nov. 2015.

• D. Lavenier, Hybrid assembly based on long reads, "Journée Scientifique Génomique et Bio-Informatique", France, on Dec. 2015.

Scientific expertise

• Expert for the MEI (International Expertise Mission), French Research Ministry [D. Lavenier]

• Member of the Scientific Council of BioGenOuest [D. Lavenier]

• Member of the Scientific Council of the Computational Biology Institute of Montpellier [D. Lavenier]

Research and teaching administration

• Member of « Conseil pédagogique de l'ISTIC » [R. Andonov]

• Responsible of the 3rd Year Computer Science BSc at ISTIC [R. Andonov]

• Member of the local Inria Rennes CDT (Technologic Transfer Commission) [D. Lavenier]

• Member of the steering committee of the INRA BIPAA Platform (BioInformatics Platform for Agro-ecosystems Arthropods) [D. Lavenier]

• Member of the steering committee of The GenOuest Platform (Bioinformatics Platform of BioGenOuest) [D. Lavenier]

• Representative of the environmental axis of UMR IRISA [C. Lemaitre]

• Inria center referee of Scientific mediation [P. Peterlongo]

• Member of the redaction committee Ouest Inria [P. Peterlongo]

• INRA Engineer recruitment committee [C. Lemaitre]

• Bordeaux University Engineer recruitment committee [C. Lemaitre]

• INRA Engineer recruitment committee, STLO, Rennes [F. Legeai]

• Assistant Professor recruitment committee, University of Brest [D. Lavenier]

• Professor recruitment committee, Polytech Montpellier [D. Lavenier]

• Scientific Responsible for International Relationships at ISTIC [A. Mucherino]

• Member of "Commission Affaires Internationales" at University of Rennes 1 [A. Mucherino]

• Member of the ISA Phd grant attribution jury [P. Peterlongo]

• AGOS first secretary [P. Peterlongo]