MORPHEME - 2015 - Annual activity report

MORPHEME

MORPHEME - 2015

Project-Team Morpheme

Members

Overall Objectives

Research Program

Research Program

Highlights of the Year

New Software and Platforms

BioLib
PIB
Stracking

New Results

Exact continuous penalties for $ℓ_{2}$ - $ℓ_{0}$ minimization
Application of the Continuous Exact $ℓ_{0}$ relaxation to Channel and DOA sparse estimation problems
From TIRF microscope calibration to 3D biological reconstructions
Phase estimation in Differential Interference Contrast (DIC) microscopy
Spatio-temporal registration of 3D microscopy image sequences of Arabidopsis floral meristems
Epidermal cell layer thickness variability in Arabidopsis floral meristems
Statistical Characterization, Modelling and Classification of Morphological Changes in imp Mutant Drosophila Gamma Neurons
Genome-wide search for factors that control the assembly of RNA granules
Cells detection using segmentation competition
Vesicles trajectory detection and analysis
Extraction and Analysis of the Vascular Network to Classify and Grade Kidney Tumors in Histological Imaging

Bilateral Contracts and Grants with Industry

Bilateral Contracts with Industry

Partnerships and Cooperations

Regional Initiatives
National Initiatives
International Initiatives
International Research Visitors

Dissemination

Promoting Scientific Activities
Teaching - Supervision - Juries
Popularization

Bibliography

Publications of the year
References in notes

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Section: New Software and Platforms

BioLib

Keyword: Biomedical imaging

Functional Description

Library of image analysis for biology: object detection, tracking. This year some new developments for embedding attractive interactions in the Multiple Births and Cut algorithm have been included.

Participants: Sylvain Prigent, Xavier Descombes, Grégoire Malandain, Étienne Delclaux, Emmanuel Soubies and Sen Wang.
Contact: Xavier Descombes

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