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Bibliography

Major publications by the team in recent years
  • 1L. Boudin, L. Desvillettes, C. Grandmont, A. Moussa.

    Global existence of solutions for the coupled Vlasov and Navier-Stokes equations, in: Differential and integral equations, November 2009, vol. 22, no 11-12, pp. 1247-1271.

    https://hal.archives-ouvertes.fr/hal-00331895
  • 2L. Boudin, B. Grec, F. Salvarani.

    A mathematical and numerical analysis of the Maxwell-Stefan diffusion equations, in: Discrete and Continuous Dynamical Systems - Series B, 2012, vol. 17, no 5, pp. 1427-1440. [ DOI : 10.3934/dcdsb.2012.17.1427 ]

    https://hal.archives-ouvertes.fr/hal-00490511
  • 3M. Boulakia, S. Cazeau, M. A. Fernández, J.-F. Gerbeau, N. Zemzemi.

    Mathematical Modeling of Electrocardiograms: A Numerical Study, in: Annals of Biomedical Engineering, 2010, vol. 38, no 3, pp. 1071-1097. [ DOI : 10.1007/s10439-009-9873-0 ]

    https://hal.inria.fr/inria-00400490
  • 4M. Boulakia, S. Guerrero.

    Regular solutions of a problem coupling a compressible fluid and an elastic structure, in: Journal de Mathématiques Pures et Appliquées, 2010, vol. 94, no 4, pp. 341-365. [ DOI : 10.1016/j.matpur.2010.04.002 ]

    https://hal.inria.fr/hal-00648710
  • 5J. Christophe, T. Ishikawa, N. Matsuki, Y. Imai, K. Takase, M. Thiriet, T. Yamaguchi.

    Patient-specific morphological and blood flow analysis of pulmonary artery in the case of severe deformations of the lung due to pneumothorax, in: Journal of Biomechanical Science and Engineering, 2010, vol. 5, no 5, pp. 485-498.

    https://hal.inria.fr/inria-00543090
  • 6M. A. Fernández, J. Mullaert, M. Vidrascu.

    Explicit Robin-Neumann schemes for the coupling of incompressible fluids with thin-walled structures, in: Computer Methods in Applied Mechanics and Engineering, 2013, vol. 267, pp. 566-593. [ DOI : 10.1016/j.cma.2013.09.020 ]

    https://hal.inria.fr/hal-00784903
  • 7J.-F. Gerbeau, D. Lombardi.

    Approximated Lax Pairs for the Reduced Order Integration of Nonlinear Evolution Equations, in: Journal of Computational Physics, May 2014, vol. 265, pp. 246-269. [ DOI : 10.1016/j.jcp.2014.01.047 ]

    https://hal.inria.fr/hal-00933172
  • 8C. Grandmont, M. Hillairet.

    Existence of global strong solutions to a beam-fluid interaction system, in: Archive for Rational Mechanics and Analysis, 2016. [ DOI : 10.1007/s00205-015-0954-y ]

    https://hal.inria.fr/hal-01138736
  • 9P. Moireau, C. Bertoglio, N. Xiao, C. A. Figueroa, C. Taylor, D. Chapelle, J.-F. Gerbeau.

    Sequential identification of boundary support parameters in a fluid-structure vascular model using patient image data, in: Biomechanics and Modeling in Mechanobiology, July 2012, vol. 12, no 3, pp. 475-496. [ DOI : 10.1007/s10237-012-0418-3 ]

    https://hal.inria.fr/hal-00760703
  • 10S. Pant, B. Fabrèges, J.-F. Gerbeau, I. Vignon-Clementel.

    A methodological paradigm for patient-specific multi-scale CFD simulations: from clinical measurements to parameter estimates for individual analysis, in: International Journal for Numerical Methods in Biomedical Engineering, December 2014, vol. 30, no 12, pp. 1614–1648. [ DOI : 10.1002/cnm.2692 ]

    https://hal.inria.fr/hal-01093879
  • 11I. Vignon-Clementel, A. Marsden, J. Feinstein.

    A Primer on Computational Simulation in Congenital Heart Disease for the Clinician, in: Progress in Pediatric Cardiology, 2010, vol. 30, no 1-2, pp. 3-13, Fondation Leducq. [ DOI : 10.1016/j.ppedcard.2010.09.002 ]

    https://hal.inria.fr/inria-00542957
Publications of the year

Doctoral Dissertations and Habilitation Theses

  • 12M. Landajuela Larma.

    Coupling schemes and unfitted mesh methods for fluid-structure interaction, Université Pierre et Marie Curie - Paris VI, March 2016.

    https://tel.archives-ouvertes.fr/tel-01366696
  • 13I. Vignon-Clementel.

    Blood and air flow multi-scale simulations based on real data, UPMC - Paris 6 Sorbonne Universités, March 2016, Habilitation à diriger des recherches.

    https://hal.inria.fr/tel-01418167

Articles in International Peer-Reviewed Journals

  • 14F. Alauzet, B. Fabrèges, M. A. Fernández, M. Landajuela.

    Nitsche-XFEM for the coupling of an incompressible fluid with immersed thin-walled structures, in: Computer Methods in Applied Mechanics and Engineering, January 2016, vol. 301, pp. 300-335. [ DOI : 10.1016/j.cma.2015.12.015 ]

    https://hal.inria.fr/hal-01149225
  • 15M. Aletti, J.-F. Gerbeau, D. Lombardi.

    A simplified fluid-structure model for arterial flow. Application to retinal hemodynamics, in: Computational Methods in Applied Mechanics and Engineering, 2016, vol. 306, pp. 77-94. [ DOI : 10.1016/j.cma.2016.03.044 ]

    https://hal.archives-ouvertes.fr/hal-01296940
  • 16G. Arbia, I. Vignon-Clementel, T.-Y. Hsia, J.-F. Gerbeau.

    Modified Navier-Stokes equations for the outflow boundary conditions in hemodynamics, in: European Journal of Mechanics - B/Fluids, June 2016. [ DOI : 10.1016/j.euromechflu.2016.06.001 ]

    https://hal.archives-ouvertes.fr/hal-01328501
  • 17C. Audebert, M. Bekheit, P. Bucur, E. Vibert, I. Vignon-Clementel.

    Partial hepatectomy hemodynamics changes: Experimental data explained by closed-loop lumped modeling, in: Journal of Biomechanics, November 2016. [ DOI : 10.1016/j.jbiomech.2016.11.037 ]

    https://hal.archives-ouvertes.fr/hal-01404771
  • 18C. Audebert, P. Bucur, M. Bekheit, E. Vibert, I. Vignon-Clementel, J.-F. Gerbeau.

    Kinetic scheme for arterial and venous blood flow, and application to partial hepatectomy modeling, in: Computer Methods in Applied Mechanics and Engineering, February 2017, vol. 314, pp. 102-125. [ DOI : 10.1016/j.cma.2016.07.009 ]

    https://hal.archives-ouvertes.fr/hal-01347500
  • 19F. Bonaldi, G. Geymonat, F. Krasucki, M. Vidrascu.

    Mathematical and numerical modeling of plate dynamics with rotational inertia, in: AACE Journal, 2016, pp. 1 - 20.

    https://hal.inria.fr/hal-01413037
  • 20L. Boudin, F. Salvarani.

    Opinion dynamics: kinetic modelling with mass media, application to the Scottish independence referendum, in: Physica A, 2016, vol. 444, pp. 448-457. [ DOI : 10.1016/j.physa.2015.10.014 ]

    https://hal.archives-ouvertes.fr/hal-01114091
  • 21M. Boulakia.

    Quantification of the unique continuation property for the nonstationary Stokes problem, in: Mathematical Control and Related Fields, March 2016.

    https://hal.inria.fr/hal-01094490
  • 22P. Bucur, M. Bekheit, C. Audebert, I. E. Vignon-Clementel, E. Vibert.

    Simplified technique for 75% and 90% hepatic resection with hemodynamic monitoring in large white swine model, in: Journal of Surgical Research, 2017. [ DOI : 10.1016/j.jss.2016.09.018 ]

    https://hal.archives-ouvertes.fr/hal-01405171
  • 23E. Burman, A. Ern, M. A. Fernández.

    Fractional-step methods and finite elements with symmetric stabilization for the transient Oseen problem, in: ESAIM: Mathematical Modelling and Numerical Analysis, April 2016. [ DOI : 10.1051/m2an/2016028 ]

    https://hal.inria.fr/hal-01218328
  • 24A. Caiazzo, R. Guibert, I. E. Vignon-Clementel.

    A reduced-order modeling for efficient design study of artificial valve in enlarged ventricular outflow tracts, in: Computer Methods in Biomechanics and Biomedical Engineering, 2016, vol. 19, no 12, pp. 1314 - 1318. [ DOI : 10.1080/10255842.2015.1133811 ]

    https://hal.inria.fr/hal-01414386
  • 25I. Cavero, J.-M. Guillon, V. Ballet, M. Clements, J.-F. Gerbeau, H. Holzgrefe.

    Comprehensive in vitro Proarrhythmia Assay (CiPA): Pending issues for successful validation and implementation, in: Journal of Pharmacological and Toxicological Methods, 2016. [ DOI : 10.1016/j.vascn.2016.05.012 ]

    https://hal.inria.fr/hal-01328481
  • 26Y. Deleuze, M. Thiriet, T. W. Sheu.

    On three-dimensional ALE finite element model for simulating deformed interstitial medium in the presence of a moving needle, in: Computers and Fluids, 2016. [ DOI : 10.1016/j.compfluid.2016.08.001 ]

    http://hal.upmc.fr/hal-01355051
  • 27M. A. Fernández, J. Mullaert.

    Convergence and error analysis for a class of splitting schemes in incompressible fluid-structure interaction, in: IMA Journal of Numerical Analysis, October 2016, vol. 36, no 4, pp. 1748-1782. [ DOI : 10.1093/imanum/drv055 ]

    https://hal.inria.fr/hal-01102975
  • 28C. Grandmont, M. Hillairet.

    Existence of global strong solutions to a beam-fluid interaction system, in: Archive for Rational Mechanics and Analysis, 2016. [ DOI : 10.1007/s00205-015-0954-y ]

    https://hal.inria.fr/hal-01138736
  • 29N. Jagiella, B. Müller, M. Müller, I. E. Vignon-Clementel, D. Drasdo.

    Inferring Growth Control Mechanisms in Growing Multi-cellular Spheroids of NSCLC Cells from Spatial-Temporal Image Data, in: PLoS Computational Biology, 2016, vol. 12, no 2, e1004412. [ DOI : 10.1371/journal.pcbi.1004412 ]

    http://hal.upmc.fr/hal-01244593
  • 30M. Landajuela, M. Vidrascu, D. Chapelle, M. A. Fernández.

    Coupling schemes for the FSI forward prediction challenge: comparative study and validation, in: International Journal for Numerical Methods in Biomedical Engineering, June 2016. [ DOI : 10.1002/cnm.2813 ]

    https://hal.inria.fr/hal-01239931
  • 31D. Lombardi, S. Pant.

    A non-parametric k-nearest neighbor entropy estimator, in: Physical Reviev E, January 2016. [ DOI : 10.1103/PhysRevE.93.013310 ]

    https://hal.inria.fr/hal-01272527
  • 32O. Miraucourt, S. Salmon, M. SZOPOS, M. Thiriet.

    Blood flow in the cerebral venous system: modeling and simulation, in: Computer Methods in Biomechanics and Biomedical Engineering, 2016. [ DOI : 10.1080/10255842.2016.1247833 ]

    http://hal.upmc.fr/hal-01384285
  • 33J. M. Oakes, P. Hofemeier, I. Vignon-Clementel, J. Sznitman.

    Aerosols in Healthy and Emphysematous In Silico Pulmonary Acinar Rat Models, in: Journal of Biomechanics, 2016, vol. 49, no 11, pp. 2213-2220. [ DOI : 10.1016/j.jbiomech.2015.11.026 ]

    https://hal.inria.fr/hal-01244458
  • 34J. M. Oakes, S. C. Shadden, C. Grandmont, I. Vignon-Clementel.

    Aerosol Transport Throughout Inspiration and Expiration in the Pulmonary Airways, in: International Journal for Numerical Methods in Biomedical Engineering, 2016.

    https://hal.inria.fr/hal-01413455
  • 35S. Pant, C. Corsini, C. Baker, T.-Y. Hsia, G. Pennati, I. Vignon-Clementel.

    Data assimilation and modelling of patient-specific single-ventricle physiology with and without valve regurgitation, in: Journal of Biomechanics, July 2016, vol. 49, no 11, pp. 2162–2173. [ DOI : 10.1016/j.jbiomech.2015.11.030 ]

    https://hal.inria.fr/hal-01240146
  • 36S. Pant, C. Corsini, C. Baker, T.-Y. Hsia, G. Pennati, I. Vignon-Clementel.

    Inverse problems in reduced order models of cardiovascular haemodynamics: aspects of data-assimilation and heart-rate variability, in: Journal of the Royal Society Interface, 2017.

    https://hal.inria.fr/hal-01413446
  • 37E. Schenone, A. Collin, J.-F. Gerbeau.

    Numerical simulation of electrocardiograms for full cardiac cycles in healthy and pathological conditions, in: International Journal for Numerical Methods in Biomedical Engineering, May 2016, vol. 32, no 5, In press (in International Journal for Numerical Methods in Biomedical Engineering). [ DOI : 10.1002/cnm.2744 ]

    https://hal.inria.fr/hal-01184744
  • 38W. Yang, J. A. Feinstein, I. E. Vignon-Clementel.

    Adaptive outflow boundary conditions improve post-operative predictions after repair of peripheral pulmonary artery stenosis, in: Biomechanics and Modeling in Mechanobiology, 2016, vol. 15, no 5, pp. 1345-1353. [ DOI : 10.1007/s10237-016-0766-5 ]

    https://hal.inria.fr/hal-01414295

Articles in National Peer-Reviewed Journals

  • 39E. Vibert, I. Vignon-Clementel, D. Samuel.

    Prévention de l’insuffisance hépatique post-opératoire par modulation pneumatique de la veine porte, in: Hépato-Gastro & Oncologie Digestive, January 2016, vol. 23, no 1, pp. 90-4. [ DOI : 10.1684/hpg.2015.1250 ]

    https://hal.inria.fr/hal-01414577

International Conferences with Proceedings

  • 40Y. Yin, O. Sedlaczek, J. Lotz, J. Olesch, K. Breuhahn, D. Drasdo, I. Vignon-Clementel.

    Tumor Microvasculature in Lung Cancer and Diffusion-Weighted MRI: Preliminary Results, in: IEEE Nuclear Science Symposuim & Medical Imaging Conference, Strasbourg, France, October 2016.

    https://hal.inria.fr/hal-01421152
  • 41Y. Yin, O. Sedlaczek, A. Warth, M. González-Vallinas, K. Breuhahn, I. Vignon-Clementel, D. Drasdo.

    Quantitative Estimation of Tumor Cellularity Based on Histology Data, in: IEEE Nuclear Science Symposuim & Medical Imaging Conference, Oct 2016, Strasbourg, France, October 2016.

    https://hal.inria.fr/hal-01421163

Scientific Books (or Scientific Book chapters)

  • 42Y. Deleuze, M. Thiriet, T. W. Sheu.

    On Three-Dimensional ALE Finite Element Model For Simulating Interstitial Medium Deformation in the Presence of a Moving Needle, in: Advances in Computational Fluid-Structure Interaction and Flow Simulation, Y. Bazilevs, K. Takizawa (editors), Birkhäuser Basel, October 2016. [ DOI : 10.1007/978-3-319-40827-9_27 ]

    http://hal.upmc.fr/hal-01240292
  • 43M. Thiriet, W.-H. Sheu, A. Garon.

    Biofluid Flow and Heat Transfer, in: Handbook of Fluid Dynamics, R. W. Johnson (editor), CRC Press, 2016, 2nd Edition. [ DOI : 10.1201/b19031-35 ]

    http://hal.upmc.fr/hal-01393604

Internal Reports

  • 44M. A. Fernández, M. Landajuela.

    Unfitted mesh formulations and splitting schemes for incompressible fluid/thin-walled structure interaction, Inria, April 2016, no RR-8908.

    https://hal.inria.fr/hal-01309462

Other Publications

  • 45M. Aletti, D. Lombardi.

    A Reduced Order representation of the Poincaré-Steklov operator: an application to coupled multi-physics problems, November 2016, working paper or preprint.

    https://hal-auf.archives-ouvertes.fr/hal-01396286
  • 46L. Boudin, C. Grandmont, A. Moussa.

    Global existence of solutions to the incompressible Navier-Stokes-Vlasov equations in a time-dependent domain, May 2016, working paper or preprint.

    https://hal.inria.fr/hal-01312262
  • 47L. Boudin, B. Grec, V. Pavan.

    The Maxwell-Stefan diffusion limit for a kinetic model of mixtures with general cross sections, April 2016, working paper or preprint.

    https://hal.inria.fr/hal-01303312
  • 48J. Bouyssier, M. Bendahmanne, Y. Coudière, J.-F. Gerbeau, J. Pedron, P. Zitoun, N. Zemzemi.

    Parameters estimation approach for the MEA/hiPSC-CM assays, September 2016, Journées scientifiques du LIRYC, Poster.

    https://hal.inria.fr/hal-01409683
  • 49V. Ehrlacher, D. Lombardi.

    A dynamical adaptive tensor method for the Vlasov-Poisson system, June 2016, working paper or preprint.

    https://hal.archives-ouvertes.fr/hal-01335507
  • 50J.-F. Gerbeau, D. Lombardi, E. Schenone.

    Approximated lax pairs and empirical interpolation for nonlinear parabolic partial differential equations , February 2016, working paper or preprint.

    https://hal.inria.fr/hal-01278778
  • 51J.-F. Gerbeau, D. Lombardi, E. Tixier.

    A moment-matching method to study the variability of phenomena described by partial differential equations, November 2016, working paper or preprint.

    https://hal.archives-ouvertes.fr/hal-01391254
  • 52N. Pozin, S. Montesantos, I. Katz, M. Pichelin, I. E. Vignon-Clementel, C. Grandmont.

    A tree-parenchyma coupled model for lung ventilation simulation, September 2016, working paper or preprint.

    https://hal.archives-ouvertes.fr/hal-01407055
  • 53Y. Yin, O. Sedlaczek, B. Müller, A. Warth, M. González-Vallinas, B. Lahrmann, N. Grabe, H.-U. Kauczor, K. Breuhahn, I. Vignon-Clementel, D. Drasdo.

    Tumor cell load and heterogeneity estimation from diffusion-weighted MRI calibrated with histological data: an example from lung cancer, December 2016, working paper or preprint.

    https://hal.inria.fr/hal-01421398
References in notes
  • 54A. Amsden, P. O'Rourke, T. Butler.

    A computer program for chemically reactive flows with sprays, Los Alamos National Laboratory, 1989, no LA-11560-MS.
  • 55M. A. Biot.

    Theory of propagation of elastic waves in a fluid-saturated porous solid. II higher frequency range, in: J. Acoust. Soc. Am., 1956, vol. 28, pp. 179–191.
  • 56D. Chapelle, J. Sainte-Marie, J.-F. Gerbeau, I. Vignon-Clementel.

    A poroelastic model valid in large strains with applications to perfusion in cardiac modeling, in: Computational Mechanics, 2010, vol. 46, no 1, pp. 91-101. [ DOI : 10.1007/s00466-009-0452-x ]
  • 57J. Dupays, Y. Fabignon, P. Villedieu, G. Lavergne, G. Estivalezes.

    Some aspects of two phase flows in solid propellant rocket motors, in Solid propellant chemistry, combustion and interior ballistics, in: Progress in Astronautics and Aeronautics, V. Yang, T. Brill, W. Pen (editors), Academic Press, 2000, vol. 185.
  • 58G. Lines, P. Grottum, A. Tveito.

    Modeling the electrical activity of the heart. A bidomain model of the ventricles embedded in a torso, in: Comput. Visual. Sci., 2003, vol. 5, pp. 195-213.
  • 59R. Motte.

    A numerical method for solving particle-fluid equations, in: Trends in numerical and physical modeling for industrial multiphase flows, Cargèse, France, 2000.
  • 60A. Quarteroni, S. Ragni, A. Veneziani.

    Coupling between lumped and distributed models for blood flow problems, in: Comput. Visual Sci., 2001, vol. 4, pp. 111–124.
  • 61F. Sachse.

    Computational Cardiology: Modeling of Anatomy, Electrophysiology, and Mechanics, Springer-Verlag, 2004.
  • 62J. Sundnes, G. Lines, X. Cai, B. Nielsen, K.-A. Mardal, A. Tveito.

    Computing the electrical activity in the heart, Springer-Verlag, 2006.
  • 63K. Terzaghi.

    Theoretical Soil Mechanics, John Wiley and Sons, New-York, 1943.
  • 64F. Williams.

    Combustion theory, 2nd, Benjamin Cummings, 1985.


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