NANO-D - 2018 - Annual activity report

NANO-D

NANO-D - 2018

Project-Team Nano-d

Team, Visitors, External Collaborators

Overall Objectives

Research Program

Highlights of the Year

New Software and Platforms

New Results

Generating conformational transition paths with low potential-energy barriers for proteins
ART-RRT: As-Rigid-As-Possible Exploration of Ligand Unbinding Pathways
Atomistic modelling and simulation of transmission electron microscopy images: application to intrinsic defects of graphene
Impact of hydrogen on graphene-based materials: atomistic modeling and simulation of HRSTEM images.
Atomistic modelling of diamond-type Si $_{x}$ Ge $_{y}$ C $_{z}$ Sn $_{1 - x - y - z}$ crystals for realistic transmission electron microscopy image simulations
Analytical symmetry detection method AnAnaS
Deep Learning for Symmetry detection
New method for protein model quality assessment Ornate

Partnerships and Cooperations

Dissemination

Bibliography

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Creation of the Team: 2008 January 01, updated into Project-Team: 2014 July 01, end of the Project-Team: 2018 September 30

Section: Team, Visitors, External Collaborators

Research Scientists

Stephane Redon [Team leader before 2018, Inria, Senior Researcher, HDR]

Sergei Grudinin [Team leader since 2018, CNRS, Researcher]

Leonard Jaillet [Inria, Starting Research Position]

Post-Doctoral Fellows

Didier Devaurs [Univ Grenoble Alpes, from Dec 2018]

Dmitriy Marin [Inria, until Sep 2018]

PhD Students

Guillaume Pages [Inria]

Maria Kadukova [Univ Grenoble Alpes]

Francois Rousse [Inria, until May 2018]

Semeho Edorh [Inria, until Jan 2018]

Alexandre Hoffmann [Inria, until Jan 2018]

Minh Khoa Nguyen [Inria, until Jan 2018]

Technical staff

Jocelyn Gate [Inria, until Sep 2018, granted by FP7 PoC SAMSON project]

Yassine Naimi [Inria, until Sep 2018]

Interns

Amal Akkari [Inria, from Jun 2018 until Nov 2018]

Loic Broyer [Univ Grenoble Alpes, from Jun 2018 until Jul 2018]

Benoit Charmettant [Inria, from Jun 2018 until Aug 2018]

Anastasia Konik [Inria, from May 2018 until Sep 2018]

Khalid Mustafin [Inria, from Sep 2018]

Administrative Assistant

Maria Immaculada Presseguer [Inria]

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