Section: Dissemination

Teaching - Supervision - Juries

Teaching

• Licence : C. Delahaye, G. Siekaniec, Python, 48 h, L1, Univ. Rennes 1, France.

• Licence : R. Andonov, Graph Algorithms, 60h, L3, Univ. Rennes 1, France.

• Licence : K. Da Silva, Algorithms and Complexity, 36 h, L3, ENSAI, Rennes, France.

• Licence : W. Delage, Introduction to Biostatistics, 36 h, L2, Univ. Rennes 1, France.

• Master : R. Andonov, S. Francois, Operational research, 82h, M1 Miage, Univ. Rennes 1, France.

• Master : G. Siekaniec, Python, 21 h, M1, Univ. Rennes 1, France.

• Master : K. Da Silva, Statistical learning, 22h, M1, Univ. Rennes 1, France.

• Master : C. Lemaitre, P. Peterlongo, Algorithms on Sequences, 52h, M2, Univ. Rennes 1, France.

• Master : C. Lemaitre, T. Lemane, Bioinformatics of Sequences, 40h, M1, Univ. Rennes 1, France.

• Master : P. Peterlongo, Experimental Bioinformactics, 24h, M1, ENS Rennes, France.

• Master : F. Legeai, RNA-Seq, Metagenomics and Variant discovery, 12h, M2, National Superior School Of Agronomy, Rennes, France.

• Master : R. Andonov, Advanced Algorithmics, 25h, Univ. Rennes 1, France.

• Master : D. Lavenier, Memory Efficient Algorithms for Big Data, Engineering School, ESIR, Rennes.

• Master : W. Delage, Internship jury, 6 h, M1, Univ. Rennes 1, France

Supervision

• PhD in progress : S. François, Combinatorial Optimization Approaches for Bioinformatics, 01/10/2016-30/09/2019, R. Andonov.

• PhD in progress : L. Lecompte, Structural Variant detection in long-read sequencing data, 01/09/2017, D. Lavenier and C. Lemaitre.

• PhD in progress : W. Delage, De novo local assembly approaches for the detection of complex genomic variations in rare diseases, 01/10/2017, J. Thévenon and C. Lemaitre.

• PhD in progress: K. da Silva, Metacatalogue : a new framework for intestinal microbiota sequencing data mining, 01/10/2018, M. Berland, N. Pons and P. Peterlongo.

• PhD in progress: G. Siekaniec, Differential characterization of strains of bacterial species, 01/10/2018, E. Guédon, E. Roux and J. Nicolas.

• PhD in progress: C. Delahaye, Robust interactive reconstruction of polyploid haplotypes, 01/10/2019, J. Nicolas

• PhD in progress: T. Lemane, unbiased detection of neurodegenerative structural variants using k-mer matrices, 01/10/2019, P. Peterlongo

Juries

• Member of Habilitation thesis jury. S. Caboche, Univ. Lille [P. Peterlongo] R. Eyraud, Univ. Marseille [J. Nicolas, referee]

• President of PhD thesis jury. J. Wanza, University of Nice Sophia Antipolis [D. Lavenier], M. Guillemé, Univ. Rennes [J. Nicolas]

• Referee of Ph-D thesis jury. Kevin Gravouil, Univ Clermont Auvergne [P. Peterlongo]

• Member of PhD thesis juries. Lyam Baudry, University Paris-Sorbonne [C. Lemaitre], Pierre Morisse, Univ. Rouen [P. Peterlongo], Pierre Marijon, Univ Lille [P. Peterlongo], Franklin Delehelle, University of Toulouse [D. Lavenier], Lucas Bourneuf, Univ. Rennes [J. Nicolas].

• Member of PhD thesis committee. Chi Nguyen Lam, Univ. Brest [D. Lavenier], Benjamin Churcheward, Univ. Nantes [D. Lavenier], Victor Gaborit, Inserm Nantes [P. Peterlongo], Guillaume Gautreau CEA [P. Peterlongo], Sébastien François, Univ. Rennes [J. Nicolas], Mikaïl Demirdelen, Univ. Rennes [J. Nicolas], Hugo Talibart, Univ. Rennes [J. Nicolas].