Bibliography

Publications of the year

Doctoral Dissertations and Habilitation Theses

1F. Besse.

Régulation des ARNms et Morphogenèse axonale chez la drosophile, Université de Nice Sophia-Antipolis, October 2012, HDR.
2S. Prigent.

Apport de l'imagerie multi et hyperspectrale pour l'évaluation de la pigmentation de la peau, Université de Nice Sophia-Antipolis, November 2012.

http://hal.inria.fr/tel-00764831

Articles in International Peer-Reviewed Journals

3C. Benedek, X. Descombes, J. Zerubia.

Building Development Monitoring in Multitemporal Remotely Sensed Image Pairs with Stochastic Birth-Death Dynamics, in: IEEE Transactions on Pattern Analysis and Machine Intelligence, January 2012, vol. 34, n^o 1, p. 33-50. [ DOI : 10.1109/TPAMI.2011.94 ]

http://hal.inria.fr/hal-00730552
4M. Carlavan, L. Blanc-Féraud.

Sparse Poisson Noisy Image Deblurring, in: IEEE Transactions on Image Processing, 2012, vol. 21, n^o 4, p. 1834-1846.

http://hal.inria.fr/inria-00634896
5D. Graziani, G. Aubert, L. Blanc-Féraud.

Analysis of a new variational model to restore point-like and curve-like singularities in imaging, in: Applied Mathematics and Optimization, 2012.

http://hal.inria.fr/inria-00522098
6C. Person, V. Louis-Dorr, S. Poussier, O. Commowick, G. Malandain, L. Maillard, D. Wolf, N. Gilet, V. Roch, G. Karcher, P.-Y. Marie.

Voxel-based quantitative analysis of brain images from F-18 Fluorodeoxyglucose Positron Emission Tomography with a Block-Matching algorithm for spatial normalization, in: Clinical Nuclear Medicine, 2012, vol. 37, n^o 3, p. 268-273. [ DOI : 10.1097/RLU.0b013e3182443b2d ]

http://hal.inria.fr/hal-00651731
7E. Zhizhina, X. Descombes.

Double Annealing Regimes in the Multiple Birth-and-Death Stochastic Algorithms, in: Markov Processes and Related Fields, 2012, vol. 18, p. 441-456.

http://hal.inria.fr/hal-00735447
8J. Zhou, C. Proisy, X. Descombes, G. Le Maire, Y. Nouvellon, J.-L. Stape, G. Viennois, J. Zerubia, P. Couteron.

Mapping local density of young Eucalyptus plantations by individual tree detection in high spatial resolution satellite images, in: Forest Ecology and Management, 2012. [ DOI : 10.1016/j.foreco.2012.10.007 ]

http://hal.inria.fr/hal-00741010

International Conferences with Proceedings

9S. Ben Hadj, L. Blanc-Féraud.

Depth-variant image restoration in 3D fluorescence microscopy: two approaches under Gaussian and Poissonian noise conditions, in: IEEE International Symposium on Biomedical Imaging (ISBI), Barcelone, Spain, May 2012.

http://hal.inria.fr/hal-00684983
10S. Ben Hadj, L. Blanc-Féraud.

Modeling and removing depth-variant blur from 3D fluorescence microscopy, in: International Conference on Acoustics, Speech, and Signal Processing (ICASSP), Kyoto, Japan, March 2012.

http://hal.inria.fr/hal-00684975
11L. Blanc-Féraud.

ML estimation of hyperparameters in inverse problems with wavelet regularisation, in: Workshop Optimization Techniques for Inverse Problems II, Modena, France, September 2012.

http://hal.inria.fr/hal-00766745
12M. Breuilly, G. Malandain, N. Ayache, J. Darcourt, T. Pourcher, P. Franken.

Simulated breath-hold reconstruction in micro-SPECT: application to peritoneal metastases expressing NIS as reporter gene, in: 2012 SNM Annual Meeting, Miami Beach, United States, May 2012.

http://hal.inria.fr/hal-00759962
13M. Carlavan, L. Blanc-Féraud, M. Antonini, C. Thiebaut, C. Latry, Y. Bobichon.

A satellite imaging chain based on the Compressed Sensing technique, in: On-Board Payload Data Compression Workshop, Barcelone, Spain, October 2012.

http://hal.inria.fr/hal-00748523
14M. Carlavan, L. Blanc-Féraud, M. Antonini, C. Thiebaut, C. Latry, Y. Bobichon.

Global rate-distortion optimization of satellite imaging chains, in: On-Board Payload Data Compression Workshop, Barcelone, Spain, October 2012.

http://hal.inria.fr/hal-00748522
15X. Descombes, F. Plouraboué, A. El Boustani, C. Fonta, G. Le Duc, R. Serduc, T. Weitkamp.

Vascular Network Segmentation: an Unsupervised Approach, in: ISBI-IEEE International Symposium on Biomedical Imaging, Barcelona, Spain, 2012.

http://hal.inria.fr/hal-00668140
16A. Mottini, X. Descombes, F. Besse.

Axon Extraction From Fluorescent Confocal Microscopy Images, in: ISBI - International Symposium on Biomedical Imaging - 2012, Barcelona, Spain, IEEE Signal Processing Society (SPS) and IEEE Engineering in Medicine and Biology Society (EMBS), May 2012.

http://hal.inria.fr/hal-00666211
17H.-F. Yang, X. Descombes, C. Kervrann, C. Medioni, F. Besse.

Tracking Growing Axons by Particle Filtering in 3D+t Fluorescent Two-Photon Microscopy Images, in: Asian Conference on Computer Vision, Daejeon, Korea, Republic Of, November 2012.

http://hal.inria.fr/hal-00740966

National Conferences with Proceeding

18M. Breuilly, G. Malandain, J. Darcourt, T. Pourcher, P. Franken.

Prise en compte du mouvemenmt respiratoire du petit animal pour la reconstruction 3D temps synchronisé : application aux métastases péritonéales, in: 50ème Colloque de Médecine Nucléaire de Langue Française, Montpellier, France, April 2012.

http://hal.inria.fr/hal-00759954

Conferences without Proceedings

19M. Breuilly, G. Malandain, N. Ayache, J. Darcourt, T. Pourcher, P. Franken.

Simulated breath-hold reconstruction in micro-SPECT: application to peritoneal metastases expressing NIS as reporter gene, in: MIBO - second Molecular Imaging in Biology and Oncology (MIBO) workshop - 2012, Nice, France, January 2012.

http://hal.inria.fr/hal-00759929

Scientific Books (or Scientific Book chapters)

20X. Descombes.

Interacting Adaptive Filters for Multiple Objects Detection, in: Mathematical Methods for Signal and Image Analysis and Representation, L. Florack, R. Duits, G. Jongbloed, M.-C. van Lieshout, L. Davies (editors), Computational Imaging and Vision, Springer, 2012, vol. 41, p. 221-239. [ DOI : 10.1007/978-1-4471-2353-8_13 ]

http://hal.inria.fr/hal-00669582
21P. Pankajakshan, G. Engler, L. Blanc-Féraud, J. Zerubia.

Deconvolution and denoising for computational microscopy, in: Modeling in Computational Biology and Biomedecine. A Multidisciplinary Endeavor, F. Cazals, P. Kornprobst (editors), Springer, 2012, vol. XXVI, p. 117-164.

http://hal.inria.fr/hal-00766226

Books or Proceedings Editing

22L. Blanc-Féraud, P. Joubert (editors)

2nd international Workshop on New Computational Methods for Inverse Problems, IOP Science, Journal of Physics : Conference Series, IOP Sciences, 2012, vol. 386, 70 p.

http://hal.inria.fr/hal-00766228

Internal Reports

23S. Ben Hadj, L. Blanc-Féraud, G. Aubert.

Space Variant Blind Image Restoration, Inria, September 2012, n^o RR-8073, 49 p.

http://hal.inria.fr/hal-00735135
24C. Chaux, L. Blanc-Féraud.

Wavelet-based hyperparameter estimation for solving inverse problems, Inria, February 2012.

http://hal.inria.fr/hal-00668807
25S. Prigent, X. Descombes, D. Zugaj, L. Petit, A.-S. Dugaret, P. Martel, J. Zerubia.

Classification of skin hyper-pigmentation lesions with multi-spectral images, Inria, Oct 2012, n^o RR-8105.
26S. Prigent, X. Descombes, D. Zugaj, L. Petit, A.-S. Dugaret, P. Martel, J. Zerubia.

Skin lesion evaluation from multispectral images, Inria, Nov 2012, n^o RR-8105.
27E. Soubiès, P. Weiss, X. Descombes.

A 3D SEGMENTATION ALGORITHM FOR ELLIPSOIDAL SHAPES. Application to nuclei extraction., ITAV, September 2012.

http://hal.inria.fr/hal-00733187

Other Publications

28G. Aubert, D. Graziani.

A relaxation result for an inhomogeneous functional preserving point-like and curve-like singularities in image processing, 2012, To appear on International Journal of Mathematics.

http://hal.inria.fr/inria-00536206

References in notes

29S. Bonettini, R. Zanella, L. Zanni.

A scaled gradient projection method for constrained image deblurring, in: Inverse Problems, 2009, vol. 25, 015002 p.
30L. Denis, E. Thiébaut, F. Soulez.

Fast model of space-variant blurring and its application to deconvolution in astronomy, in: IEEE International Conference on Image Processing (ICIP), Brussels, Belgium, September 2011.
31N. Dey, L. Blanc-Féraud, C. Zimmer, Z. Kam, P. Roux, J. Olivo-Marin, J. Zerubia.

Richardson-Lucy Algorithm with Total Variation Regularization for 3D Confocal Microscope Deconvolution, in: Microscopy Research Technique, 2006, vol. 69, n^o 4, p. 260-266.
32R. Fernandez, P. Das, V. Mirabet, E. Moscardi, J. Traas, J.-L. Verdeil, G. Malandain, C. Godin.

Imaging plant growth in 4-D: robust tissue reconstruction and lineaging at cell resolution, in: Nature Methods, 2010, vol. 7, n^o 7, p. 547-553. [ DOI : 10.1038/nmeth.1472 ]

http://www.inria.fr/sophia/asclepios/Publications/Gregoire.Malandain/fernandez-nm-2010.pdf, http://hal.inria.fr/hal-00521491/en/
33M. Fornasier, C. Schönlieb.

Subspace Correction Methods for Total Variation and L1 Minimization, in: SIAM Journal on Numerical Analysis, 2009, vol. 47, 3397 p.
34S. Gibson, F. Lanni.

Experimental test of an analytical model of aberration in an oil-immersion objective lens used in three-dimensional light microscopy, in: JOSA A, 1991, vol. 8, n^o 10, p. 1601–1613.

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