Bibliography

Doctoral Dissertations and Habilitation Theses

• 1S. Artemova.
  
  Adaptive Algorithms for molecular simulation, Grenoble University, 2012.
• 2M. Bosson.
  
  Adaptive algorithms for computational chemistry and interactive modeling, Grenoble University, 2012.

Articles in International Peer-Reviewed Journals

• 3S. Artemova, S. Redon.
  
  Adaptively Restrained Particle Simulations, in: Physical Review Letters, November 2012, vol. 109, 190201 p. [ DOI : 10.1103/PhysRevLett.109.190201 ]
  
  http://hal.inria.fr/hal-00756121
• 4M. Bosson, S. Grudinin, X. Bouju, S. Redon.
  
  Interactive physically-based structural modeling of hydrocarbon systems, in: Journal of Computational Physics, March 2012, vol. 231, n^o 6, p. 2581-2598. [ DOI : 10.1016/j.jcp.2011.12.006 ]
  
  http://hal.inria.fr/hal-00755542
• 5M. Bosson, S. Grudinin, S. Redon.
  
  Block-Adaptive Quantum Mechanics: An Adaptive Divide-and-Conquer Approach to Interactive Quantum Chemistry, in: Journal of Computational Chemistry, October 2012. [ DOI : 10.1002/jcc.23157 ]
  
  http://hal.inria.fr/hal-00755521
• 6M. Bosson, C. Richard, A. Plet, S. Grudinin, S. Redon.
  
  Interactive quantum chemistry: A divide-and-conquer ASED-MO method, in: Journal of Computational Chemistry, March 2012, vol. 33, p. 779-790. [ DOI : 10.1002/jcc.22905 ]
  
  http://hal.inria.fr/hal-00755498
• 7I. Y. Gushchin, V. I. Gordeliy, S. Grudinin.
  
  A Novel Dimerization Interface of Cyclic Nucleotide Binding Domain, which is Disrupted in Presence of cAMP: Implications for CNG Channels Gating, in: Journal of Molecular Modeling, September 2012, vol. 18, n^o 9, p. 4053-4060. [ DOI : 10.1007/s00894-012-1404-5 ]
  
  http://hal.inria.fr/hal-00766015

• 8S. Artemova, S. Grudinin, S. Redon.
  
  A comparison of neighbor search algorithms for large rigid molecules, in: Journal of Computational Chemistry, 2011, vol. 32, n^o 13, p. 2865–2877.
• 9O. Etzmuss, J. Gross, W. Strasser.
  
  Deriving a particle system from continuum mechanics for the animation of deformable objects, in: Visualization and Computer Graphics, IEEE Transactions on, 2003, vol. 9, n^o 4, p. 538–550.
• 10R. Featherstone.
  
  A divide-and-conquer articulated-body algorithm for parallel O(log (n)) calculation of rigid-body dynamics. Part 1: Basic algorithm, in: The International Journal of Robotics Research, 1999, vol. 18, n^o 9, p. 867–875.
• 11R. Featherstone.
  
  A divide-and-conquer articulated-body algorithm for parallel O(log (n)) calculation of rigid-body dynamics. Part 2: Trees, loops, and accuracy, in: The International Journal of Robotics Research, 1999, vol. 18, n^o 9, p. 876–892.
• 12S. Grudinin, S. Redon.
  
  Practical modeling of molecular systems with symmetries, in: Journal of Computational Chemistry, 2010, vol. 31, n^o 9, p. 1799–1814.
• 13R. Hockney, J. Eastwood.
  
  Computer simulation using particles, Institute of Physics, 1992.
• 14J. Monaghan.
  
  Smoothed particle hydrodynamics, in: Reports on Progress in Physics, 2005, vol. 68, 1703 p.
• 15S. Redon, N. Galoppo, M. Lin.
  
  Adaptive dynamics of articulated bodies, in: ACM Transactions on Graphics (TOG), ACM, 2005, vol. 24, n^o 3, p. 936–945.