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MORPHEME - 2017
MORPHEME - 2017
Project-Team Morpheme
Personnel
Overall Objectives
Research Program
New Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
Dissemination
Bibliography
Project-Team Morpheme
Personnel
Overall Objectives
Research Program
New Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
Dissemination
Bibliography


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Bibliography

Publications of the year

Doctoral Dissertations and Habilitation Theses

Articles in International Peer-Reviewed Journals

  • 2D. Peurichard, F. Delebecque, A. Lorsignol, C. Barreau, J. Rouquette, X. Descombes, L. Casteilla, P. Degond.

    Simple mechanical cues could explain adipose tissue morphology, in: Journal of theoretical biology, September 2017, vol. 429, 21 p.

    https://hal.inria.fr/hal-01576486
  • 3Y. Quéau, R. Mecca, J.-D. Durou, X. Descombes.

    Photometric Stereo with Only Two Images: A Theoretical Study and Numerical Resolution, in: Image and Vision Computing, January 2017, no 57, pp. 175–191. [ DOI : 10.1016/j.imavis.2016.11.006 ]

    https://hal.archives-ouvertes.fr/hal-01334657
  • 4S. Rebegoldi, L. Bautista, L. Blanc-Féraud, M. Prato, L. Zanni, A. Plata.

    A comparison of edge-preserving approaches for differential interference contrast microscopy, in: Inverse Problems, June 2017. [ DOI : 10.1088/1361-6420/aa790a ]

    https://hal.inria.fr/hal-01568695
  • 5E. Soubies, L. Blanc-Féraud, G. Aubert.

    A Unified View of Exact Continuous Penalties for l2-l0 Minimization, in: SIAM Journal on Optimization, 2017, vol. 27, no 3. [ DOI : 10.1137/16M1059333 ]

    https://hal.inria.fr/hal-01267701

International Conferences with Proceedings

  • 6S. Gazagnes, E. Soubies, L. Blanc-Féraud.

    High density molecule localization for super-resolution microscopy using CEL0 based sparse approximation, in: ISBI 2017 - IEEE International Symposium on Biomedical Imaging, Melbourne, Australia, Proceedings of ISBI 2017, April 2017, 4 p.

    https://hal.inria.fr/hal-01443565
  • 7G. Malandain, G. Michelin.

    Coherent temporal extrapolation of labeled images, in: ISBI 2017 - International Symposium on Biomedical Imaging, Melbourne, Australia, April 2017, pp. 433 - 436. [ DOI : 10.1109/ISBI.2017.7950554 ]

    https://hal.inria.fr/hal-01574698
  • 8E. Poulain, G. Malandain, R. Vaillant.

    3D Coronary vessel tracking in x-ray projections, in: International Conference on Functional Imaging and Modeling of the Heart (FIMH), Toronto, Canada, LNCS, June 2017, vol. 10263, pp. 204-215. [ DOI : 10.1007/978-3-319-59448-4_20 ]

    https://hal.inria.fr/hal-01502128

National Conferences with Proceedings

  • 9E. Poulain, G. Malandain, R. Vaillant.

    Suivi temporel 3D de vaisseaux coronaires dans les projections rayons X, in: GRETSI, Juan-Les-Pins, France, September 2017.

    https://hal.inria.fr/hal-01544989
  • 10E. Soubies, L. Blanc-Féraud, G. Aubert.

    Quelles relaxations continues pour le critère l2-l0 ?, in: Colloque Gretsi, Juan-Les-Pins, France, September 2017, 4 p.

    https://hal.inria.fr/hal-01560319

Conferences without Proceedings

  • 11A. CHARAZAC, C. Decondé Le Butor, K. Giulietti, J.-M. A. Lobaccaro, S. Baron, J. Gilleron, P. Fenichel, X. Descombes, F. Bost, C. Stéphan, N. Chevalier.

    Quantitative image based analysis of endocrine disruptor effects on mitochondria morphology-function in prostate cancer cells, in: International Congress of Translational Research in Human Nutrition, Clermont-Ferrand, France, June 2017.

    https://hal.archives-ouvertes.fr/hal-01548783
  • 12A. Razetti, C. Medioni, G. Malandain, F. Besse, X. Descombes.

    Modeling collective axon growth from in vivo data reveals the importance of physical axon-axon interactions, in: Cell biology of the neuron: Polarity, plasticity and regeneration, Heraklion, Greece, EMBO, May 2017.

    https://hal.archives-ouvertes.fr/hal-01483505
  • 13A. Razetti, C. Medioni, G. Malandain, F. Besse, X. Descombes.

    Modelling collective axon growth from in vivo data reveals the importance of physical axon-axon interactions, in: Rencontre C@UCA 2017, Fréjus, France, June 2017.

    https://hal.archives-ouvertes.fr/hal-01643226

Scientific Books (or Scientific Book chapters)

  • 14A. Razetti, X. Descombes, C. Medioni, F. Besse.

    A Stochastic Framework for Neuronal Morphological Comparison: Application to the Study of imp Knockdown Effects in Drosophila Gamma Neurons, in: Biomedical Engineering Systems and Technologies, A. Fred, H. Gamboa (editors), CCIS, Springer, 2017, vol. 690, pp. 145-166, 9th International Joint Conference, BIOSTEC 2016, Rome, Italy, February 21–23, 2016, Revised Selected Papers. [ DOI : 10.1007/978-3-319-54717-6_9 ]

    https://hal.inria.fr/hal-01502735

Other Publications

  • 15A. CHARAZAC, C. Decondé Le Butor, M. Gueye, J. Gilleron, K. GIULETTI, M. GESSON, P. Fénichel, X. DESCOMBES, F. Bost, S. Clavel, N. Chevalier.

    Quantitative image based analysis of endocrine disruptor effects on mitochondria morphology-function in prostate cancer cells, May 2017, 1 p, ECE 2017 - European Congress of Endocrinology, Poster.

    https://hal.archives-ouvertes.fr/hal-01548773
  • 16A. CHARAZAC, C. Decondé Le Butor, M. Gueye, J. Gilleron, K. GIULETTI, M. GESSON, P. Fénichel, X. DESCOMBES, F. Bost, S. Clavel, N. Chevalier.

    Quantitative image based analysis of endocrine disruptor effects on mitochondria morphology‐function in prostate cancer cells, May 2017, 1 p, Signalife, Poster.

    https://hal.archives-ouvertes.fr/hal-01548770
References in notes
  • 17M. Carlsson.

    On convexification/optimization of functionals including an l2-misfit term, 2016, arXiv:1609.09378.
  • 18X. Descombes.

    Multiple objects detection in biological images using a marked point process framework, in: Methods, 2016. [ DOI : 10.1016/j.ymeth.2016.09.009 ]

    https://hal.inria.fr/hal-01383165
  • 19L. Guignard.

    Quantitative analysis of animal morphogenesis: from high-throughput laser imaging to 4D virtual embryo in ascidians, Université Montpellier, December 2015.

    https://hal.archives-ouvertes.fr/tel-01278725
  • 20G. Michelin, L. Guignard, U.-M. Fiuza, P. Lemaire, C. Godin, G. Malandain.

    Cell Pairings for Ascidian Embryo Registration, in: ISBI - International Symposium on Biomedical Imaging, New York, United States, April 2015. [ DOI : 10.1109/ISBI.2015.7163872 ]

    https://hal.inria.fr/hal-01113166
  • 21G. Michelin, L. Guignard, U.-M. Fiuza, G. Malandain.

    Embryo Cell Membranes Reconstruction by Tensor Voting, in: ISBI - International Symposium on Biomedical Imaging, Beijing, China, IEEE, April 2014. [ DOI : 10.1109/ISBI.2014.6868105 ]

    https://hal.inria.fr/hal-00915000
  • 22A. Mottini, X. Descombes, F. Besse.

    From Curves to Trees: A Tree-like Shapes Distance Using the Elastic Shape Analysis Framework, in: Neuroinformatics, April 2015, vol. 13, no 2, pp. 175-191. [ DOI : 10.1007/s12021-014-9255-0 ]

    https://hal.inria.fr/hal-01086777
  • 23E. Soubies, L. Blanc-Féraud, G. Aubert.

    A Continuous Exact l0 penalty (CEL0) for least squares regularized problem, in: SIAM J. on Imaging Science (SIIMS), July 2015, vol. 8, no 3, pp. pp. 1607–1639 (33 pages). [ DOI : 10.1137/151003714 ]

    https://hal.inria.fr/hal-01102492
  • 24A. Zubiolo, E. Debreuve, D. Ambrosetti, P. Pognonec, X. Descombes.

    Is the Vascular Network Discriminant Enough to Classify Renal Cell Carcinoma?, in: International Workshop on Content-based Multimedia Indexing (CBMI), Bucarest, Romania, June 2016. [ DOI : 10.1109/CBMI.2016.7500255 ]

    https://hal.archives-ouvertes.fr/hal-01344247


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